STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60938.1Isoquinoline 1-oxidoreductase subunit alpha; COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs. (154 aa)    
Predicted Functional Partners:
AFK60940.1
Aldehyde dehydrogenase; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
 0.988
AFK62824.1
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
 0.983
AFK63757.1
Isoquinoline 1-oxidoreductase subunit beta; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
 0.953
AFK60939.1
Aldehyde dehydrogenase.
  
 
 0.898
AFK60942.1
Hypothetical protein; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.810
AFK60904.1
Salicylate 1-monooxygenase (NahW); COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
  
 0.796
AFK60941.1
COG2068 Uncharacterized MobA-related protein.
 
  
 0.783
AFK62391.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
   
    0.755
AFK62392.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
   
    0.747
AFK62822.1
Carbon monoxide dehydrogenase medium chain (COdehydrogenase subunit M) (CO-DH M); COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 0.714
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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