STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60953.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
AFK60954.1
Hypothetical protein.
       0.558
AFK60955.1
Peptidase M24A; COG0024 Methionine aminopeptidase.
       0.558
AFK60956.1
COG0024 Methionine aminopeptidase.
       0.558
AFK61372.1
Pyruvate carboxylase, propionyl-CoA carboxylase; COG0439 Biotin carboxylase.
  
    0.437
prpB
2-methylisocitrate lyase; COG2513 PEP phosphonomutase and related enzymes.
  
  
 0.429
AFK63494.1
Hypothetical protein; COG2513 PEP phosphonomutase and related enzymes.
  
  
 0.429
AFK63766.1
Methylisocitrate lyase; COG2513 PEP phosphonomutase and related enzymes.
  
  
 0.429
AFK64047.1
Isocitrate lyase family protein; COG2513 PEP phosphonomutase and related enzymes.
  
  
 0.429
AFK61055.1
COG0372 Citrate synthase.
  
  
 0.423
AFK62119.1
COG0372 Citrate synthase.
  
  
 0.423
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.