STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60984.1ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component. (253 aa)    
Predicted Functional Partners:
AFK60983.1
ABC transporter ATPase; COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.979
AFK60982.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.974
AFK61223.1
COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.860
AFK61300.1
COG1137 ABC-type (unclassified) transport system, ATPase component.
 
 
 0.582
AFK64417.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
 0.582
AFK60981.1
SAM-dependent methyltransferase.
       0.511
AFK61224.1
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
  
  
 
0.450
AFK62389.1
Hypothetical protein.
   
    0.447
AFK63826.1
Hypothetical protein.
  
  
 0.436
AFK62595.1
Hypothetical protein; COG0778 Nitroreductase.
  
  
 0.422
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.