STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60995.1COG1414 Transcriptional regulator. (254 aa)    
Predicted Functional Partners:
AFK61466.1
COG1414 Transcriptional regulator.
  
     0.775
AFK63516.1
Transcriptional regulator family protein 6; COG1414 Transcriptional regulator.
  
     0.774
AFK64092.1
Transcriptional regulator family protein 24; COG1414 Transcriptional regulator.
  
     0.774
AFK64148.1
COG1414 Transcriptional regulator.
  
     0.774
AFK62440.1
Transcriptional regulator family protein 34; COG1414 Transcriptional regulator.
  
     0.770
AFK64100.1
Regulatory protein IclR; COG1414 Transcriptional regulator.
  
     0.770
AFK64427.1
COG1414 Transcriptional regulator.
  
     0.770
AFK63306.1
COG1414 Transcriptional regulator.
  
     0.769
AFK62439.1
COG1414 Transcriptional regulator.
  
     0.768
AFK60814.1
Regulatory protein for pca operon (activator); COG1414 Transcriptional regulator.
  
     0.767
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.