STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61015.1VgrG protein; COG3501 Uncharacterized protein conserved in bacteria. (784 aa)    
Predicted Functional Partners:
AFK61395.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.929
AFK64304.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
  
 0.885
AFK64306.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.885
AFK64307.1
Protein ImpA; COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.879
AFK61391.1
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.877
AFK64305.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.861
AFK64302.1
COG3518 Uncharacterized protein conserved in bacteria.
 
  
 0.859
AFK61394.1
Lipoprotein; COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.841
AFK64301.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.837
AFK64303.1
COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion.
 
  
 0.803
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.