STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61033.1COG3181 Uncharacterized protein conserved in bacteria. (329 aa)    
Predicted Functional Partners:
AFK61034.1
COG1960 Acyl-CoA dehydrogenases.
       0.773
AFK61035.1
Hypothetical protein; COG1960 Acyl-CoA dehydrogenases.
       0.773
AFK60870.1
COG3333 Uncharacterized protein conserved in bacteria.
  
 0.748
AFK61036.1
COG0726 Predicted xylanase/chitin deacetylase.
       0.590
AFK61031.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
       0.556
AFK61032.1
COG1042 Acyl-CoA synthetase (NDP forming).
       0.556
AFK62353.1
Hypothetical protein.
 
    0.503
AFK64430.1
Hypothetical protein.
 
    0.469
AFK61030.1
COG1414 Transcriptional regulator.
       0.402
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.