STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61039.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AFK63875.1
COG1652 Uncharacterized protein containing LysM domain.
 
   0.884
AFK61040.1
Hypothetical protein.
       0.534
AFK61121.1
Transglycosylase associated family protein; COG2261 Predicted membrane protein.
 
  
 0.506
AFK62247.1
Hypothetical protein; COG0655 Multimeric flavodoxin WrbA.
  
    0.446
AFK64135.1
COG3126 Uncharacterized protein conserved in bacteria.
  
    0.409
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.