STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61058.1COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (235 aa)    
Predicted Functional Partners:
AFK61056.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
     0.979
AFK61158.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.783
AFK64254.1
Long-chain fatty acid:CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.762
AFK64010.1
long-chain-fatty-acid--CoA ligase LcfB; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.759
AFK64088.1
AMP-binding protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.746
AFK61185.1
AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.745
AFK61059.1
COG3181 Uncharacterized protein conserved in bacteria.
       0.732
AFK64347.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.725
AFK63787.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.723
AFK63391.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.711
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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