STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61098.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
AFK62958.1
Hypothetical protein.
  
     0.730
AFK63519.1
Thioredoxin-like protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.725
AFK62903.1
COG3203 Outer membrane protein (porin).
  
     0.711
AFK61320.1
COG3165 Uncharacterized protein conserved in bacteria.
  
     0.709
AFK61097.1
Hypothetical protein.
       0.697
AFK61302.1
Hypothetical protein.
  
     0.694
AFK61199.1
Hypothetical protein.
  
     0.683
AFK61096.1
COG3209 Rhs family protein.
 
     0.658
AFK63515.1
Phasin family domain-containing protein.
  
     0.648
AFK62311.1
Hypothetical protein.
  
    0.634
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.