STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61137.1Transmembrane protein. (261 aa)    
Predicted Functional Partners:
AFK61138.1
COG3045 Uncharacterized protein conserved in bacteria.
       0.655
AFK61139.1
COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
 
     0.534
AFK61199.1
Hypothetical protein.
  
     0.530
AFK62943.1
COG3308 Predicted membrane protein.
  
     0.522
AFK62212.1
Hypothetical protein.
  
     0.478
AFK61064.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.468
AFK61629.1
COG2891 Cell shape-determining protein.
  
     0.461
AFK60794.1
COG3713 Outer membrane protein V.
  
     0.447
AFK62364.1
COG3310 Uncharacterized protein conserved in bacteria.
  
     0.434
AFK62085.1
Iron-sulfur protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
     0.426
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.