STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61145.1COG2175 Probable taurine catabolism dioxygenase. (320 aa)    
Predicted Functional Partners:
AFK61148.1
Family 3 extracellular solute-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
    0.778
AFK61146.1
Binding-protein-dependent transport system inner membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 0.756
ssuB
ABC transporter-like protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
    0.716
AFK64152.1
Taurine ABC transporter substrate-binding protein; COG4521 ABC-type taurine transport system, periplasmic component.
  
 0.586
tauB
ABC transporter-like protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
  
 0.506
AFK64372.1
Binding-protein-dependent transport system inner membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.504
AFK61143.1
Hypothetical protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
     0.502
AFK61149.1
COG2175 Probable taurine catabolism dioxygenase.
 
    
0.487
AFK61144.1
Hypothetical protein; COG0778 Nitroreductase.
 
    0.469
AFK64370.1
COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
    0.402
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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