STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61148.1Family 3 extracellular solute-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (429 aa)    
Predicted Functional Partners:
AFK61146.1
Binding-protein-dependent transport system inner membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.996
ssuB
ABC transporter-like protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.996
AFK63959.1
Taurine ABC transporter permease; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.843
AFK61319.1
Binding-protein-dependent transporter inner membrane component family protein 39; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.825
AFK64373.1
Binding-protein-dependent transport systems inner membrane component; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.820
AFK64152.1
Taurine ABC transporter substrate-binding protein; COG4521 ABC-type taurine transport system, periplasmic component.
  
  
 0.783
AFK61149.1
COG2175 Probable taurine catabolism dioxygenase.
 
    0.780
AFK61145.1
COG2175 Probable taurine catabolism dioxygenase.
 
    0.778
AFK60912.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
     0.765
AFK61380.1
Binding-protein-dependent transporter inner membrane component family protein 56; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.755
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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