STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61157.1COG0477 Permeases of the major facilitator superfamily. (444 aa)    
Predicted Functional Partners:
AFK61158.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
 0.667
AFK61159.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 0.661
AFK61160.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 0.653
AFK62857.1
Transporter transmembrane protein; COG0477 Permeases of the major facilitator superfamily.
  
  
 0.601
AFK61161.1
COG1414 Transcriptional regulator.
  
  
 0.473
AFK64390.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.437
AFK63422.1
Major facilitator superfamily protein.
  
  
 0.409
AFK61124.1
Ferric iron ABC transporter iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.408
AFK62483.1
Iron binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.408
AFK64286.1
Extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.408
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.