STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61158.1COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (670 aa)    
Predicted Functional Partners:
AFK61160.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
 
 0.990
AFK61159.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
 0.986
AFK62347.1
Phospholipid/glycerol acyltransferase; COG0477 Permeases of the major facilitator superfamily.
  
 0.927
AFK61058.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.783
AFK64545.1
AMP-binding protein; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
 
 0.761
AFK64347.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
0.759
AFK61440.1
AMP-binding protein; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
 
0.754
AFK62810.1
COG2124 Cytochrome P450.
  
 0.752
AFK62283.1
AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
0.750
AFK64254.1
Long-chain fatty acid:CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
0.748
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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