STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61159.1COG1012 NAD-dependent aldehyde dehydrogenases. (152 aa)    
Predicted Functional Partners:
AFK61160.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); COG1012 NAD-dependent aldehyde dehydrogenases.
 
 0.995
AFK61158.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 0.986
AFK63682.1
COG1454 Alcohol dehydrogenase, class IV.
 
 0.971
AFK60754.1
NAD-dependent 4-hydroxybutyrate dehydrogenase; COG1454 Alcohol dehydrogenase, class IV.
 
 0.957
AFK64040.1
COG1454 Alcohol dehydrogenase, class IV.
 
 0.875
AFK61157.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.661
AFK63993.1
COG1454 Alcohol dehydrogenase, class IV.
 
 0.610
AFK61161.1
COG1414 Transcriptional regulator.
 
   
 0.555
AFK62866.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
  
 0.432
AFK62293.1
acetate/CoA ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
 
 0.418
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.