STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61184.1COG2070 Dioxygenases related to 2-nitropropane dioxygenase. (317 aa)    
Predicted Functional Partners:
AFK61141.1
COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
  
  0.964
AFK60803.1
Nitrite extrusion protein; COG2223 Nitrate/nitrite transporter.
  
 
 0.911
AFK60801.1
COG2181 Nitrate reductase gamma subunit.
    
  0.902
AFK61671.1
Assimilatory nitrite reductase large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.902
AFK63002.1
Hypothetical protein; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
     
 0.902
AFK63401.1
Hypothetical protein; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
  
 
0.901
narZ
COG5013 Nitrate reductase alpha subunit.
     
  0.900
narH
COG1140 Nitrate reductase beta subunit.
     
  0.900
AFK61672.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
  0.900
AFK61185.1
AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
 0.685
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.