STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61219.1Lipoprotein; COG2853 Surface lipoprotein. (190 aa)    
Predicted Functional Partners:
AFK61220.1
COG2853 Surface lipoprotein.
     0.983
AFK61222.1
Putative ABC transporter; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
     0.884
AFK61218.1
Mce related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
     0.871
AFK61221.1
Hypothetical protein.
       0.773
AFK61217.1
Membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
     0.614
AFK61224.1
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
     
 0.474
AFK63628.1
Putative TolQ-like translocation protein; COG0811 Biopolymer transport proteins.
  
     0.473
AFK61216.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
   
 0.460
AFK61223.1
COG1131 ABC-type multidrug transport system, ATPase component.
     
 0.451
dksA
dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
     0.446
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.