STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61221.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
AFK61219.1
Lipoprotein; COG2853 Surface lipoprotein.
       0.773
AFK61220.1
COG2853 Surface lipoprotein.
       0.773
AFK61222.1
Putative ABC transporter; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
       0.584
AFK61218.1
Mce related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.477
AFK61223.1
COG1131 ABC-type multidrug transport system, ATPase component.
       0.445
AFK61224.1
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
       0.445
AFK61225.1
BolA-like protein; COG5007 Predicted transcriptional regulator, BolA superfamily; Belongs to the BolA/IbaG family.
       0.445
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.445
hisG
ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
       0.445
AFK61217.1
Membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
       0.405
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.