STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61222.1Putative ABC transporter; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. (202 aa)    
Predicted Functional Partners:
AFK61218.1
Mce related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.993
AFK61217.1
Membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 
 0.955
AFK61216.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 
  0.897
AFK61219.1
Lipoprotein; COG2853 Surface lipoprotein.
 
     0.884
AFK61220.1
COG2853 Surface lipoprotein.
   
 
 0.774
AFK61224.1
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
 
     0.757
AFK61223.1
COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.734
AFK61225.1
BolA-like protein; COG5007 Predicted transcriptional regulator, BolA superfamily; Belongs to the BolA/IbaG family.
       0.709
AFK62529.1
COG2825 Outer membrane protein.
  
   
 0.694
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.691
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.