STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61288.1Hydrolase; COG1011 Predicted hydrolase (HAD superfamily). (242 aa)    
Predicted Functional Partners:
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
     
 0.667
AFK61290.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.592
AFK61291.1
Hypothetical protein; COG2823 Predicted periplasmic or secreted lipoprotein.
       0.482
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
  
  
 0.480
AFK64147.1
Cobaltochelatase; COG0714 MoxR-like ATPases.
 
   
 0.469
AFK61810.1
COG1977 Molybdopterin converting factor, small subunit.
 
    0.455
AFK61279.1
Histidine triad (HIT)-like protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
 
 
   0.427
AFK63859.1
Surface antigen family protein; COG0729 Outer membrane protein.
 
     0.410
AFK62803.1
COG1426 Uncharacterized protein conserved in bacteria.
 
     0.409
AFK61320.1
COG3165 Uncharacterized protein conserved in bacteria.
  
    0.404
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.