STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61337.1Peptidase S58, DmpA; COG3191 L-aminopeptidase/D-esterase. (190 aa)    
Predicted Functional Partners:
AFK61338.1
Peptidase S58, DmpA; COG3191 L-aminopeptidase/D-esterase.
     0.994
AFK61336.1
COG3191 L-aminopeptidase/D-esterase.
     0.992
AFK61897.1
COG3191 L-aminopeptidase/D-esterase.
 
     0.951
AFK61339.1
D-aminopeptidase family protein; COG2362 D-aminopeptidase.
   
 0.909
AFK61898.1
COG3191 L-aminopeptidase/D-esterase.
  
     0.775
AFK61335.1
Glutathione ABC transporter permease GsiD; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
    0.694
AFK61334.1
Glutathione ABC transporter permease GsiC; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
    0.647
AFK61333.1
Dipeptide-binding ABC transporter; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.497
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.