STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61365.1COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport. (168 aa)    
Predicted Functional Partners:
AFK61366.1
Hypothetical protein; COG2822 Predicted periplasmic lipoprotein involved in iron transport.
 
     0.951
AFK62483.1
Iron binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
  
 0.913
lolD
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
    0.585
AFK64134.1
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG0748 Putative heme iron utilization protein.
   
    0.531
AFK64286.1
Extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.526
AFK61124.1
Ferric iron ABC transporter iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
  
 0.445
AFK63878.1
Hypothetical protein.
  
  
 0.443
AFK64184.1
Periplasmic binding family protein 1; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
   
  
 0.428
phnP-2
Carbon-phosphorus lyase complex accessory protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
       0.416
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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