STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61380.1Binding-protein-dependent transporter inner membrane component family protein 56; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (264 aa)    
Predicted Functional Partners:
AFK61379.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 0.973
AFK61378.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.967
tauB
ABC transporter-like protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
 0.889
AFK60847.1
ABC transporter ATP-binding protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 0.852
AFK63958.1
ABC transporter substrate-binding protein; COG4521 ABC-type taurine transport system, periplasmic component.
 
  
 0.842
AFK60913.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 0.826
AFK64152.1
Taurine ABC transporter substrate-binding protein; COG4521 ABC-type taurine transport system, periplasmic component.
 
  
 0.814
AFK64371.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 0.810
AFK60912.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.808
AFK61318.1
Sulfonate/nitrate transport system substrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.778
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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