STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61395.1COG3455 Uncharacterized protein conserved in bacteria. (437 aa)    
Predicted Functional Partners:
AFK61394.1
Lipoprotein; COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.990
AFK64306.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.990
AFK64305.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.989
AFK64301.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.986
AFK64303.1
COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion.
 
  
 0.981
AFK61396.1
Type VI secretion-associated protein, BMA_A0400 family protein; COG3913 Uncharacterized protein conserved in bacteria.
 
  
 0.976
AFK64302.1
COG3518 Uncharacterized protein conserved in bacteria.
 
  
 0.971
AFK61391.1
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.968
AFK64304.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
  
 0.955
AFK64307.1
Protein ImpA; COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.946
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.