STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61414.1Hypothetical protein; COG2945 Predicted hydrolase of the alpha/beta superfamily. (223 aa)    
Predicted Functional Partners:
AFK61415.1
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
     0.777
coaX
Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.716
AFK62018.1
Hypothetical protein; COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases.
  
     0.604
AFK63042.1
Hypothetical protein; COG0183 Acetyl-CoA acetyltransferase.
 
     0.571
AFK63143.1
COG1981 Predicted membrane protein.
 
     0.543
AFK62347.1
Phospholipid/glycerol acyltransferase; COG0477 Permeases of the major facilitator superfamily.
  
     0.528
thrB
COG2334 Putative homoserine kinase type II (protein kinase fold); Belongs to the pseudomonas-type ThrB family.
  
     0.519
AFK61417.1
Hypothetical protein; Belongs to the UPF0250 family.
       0.517
AFK61416.1
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
       0.489
coq7
Hypothetical protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
 
     0.476
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.