STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61432.1ABC transporter-like protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (248 aa)    
Predicted Functional Partners:
AFK61431.1
ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 
 0.993
AFK64279.1
Permease of an ABC exporter involved in polysaccharide export; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 
 0.975
AFK64260.1
COG3563 Capsule polysaccharide export protein.
  
  
 0.871
AFK64280.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.867
AFK61433.1
COG0438 Glycosyltransferase.
  
 
 0.787
AFK64281.1
COG3524 Capsule polysaccharide export protein.
  
  
 0.726
AFK61428.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.673
AFK61429.1
GtrA family protein; COG2246 Predicted membrane protein.
 
  
 0.615
AFK64267.1
FkbM family methyltransferase; COG0500 SAM-dependent methyltransferases.
  
  
 0.602
AFK61425.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.590
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.