STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61454.1Cation diffusion facilitator family transporter; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (325 aa)    
Predicted Functional Partners:
AFK62079.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
 
 0.652
AFK61772.1
COG0039 Malate/lactate dehydrogenases.
  
    0.628
AFK61773.1
COG0039 Malate/lactate dehydrogenases.
  
    0.628
tadA
Zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.523
AFK62081.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
 
 0.505
AFK62839.1
Metal transporter ATPase; COG2217 Cation transport ATPase.
 
 
 0.449
AFK64177.1
COG2217 Cation transport ATPase.
 
 0.436
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.