STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61522.1Extra-cytoplasmic solute receptor family protein 144; COG3181 Uncharacterized protein conserved in bacteria. (327 aa)    
Predicted Functional Partners:
AFK64141.1
COG3181 Uncharacterized protein conserved in bacteria.
  
     0.769
AFK60864.1
COG3181 Uncharacterized protein conserved in bacteria.
  
     0.653
AFK61523.1
COG1309 Transcriptional regulator.
       0.581
AFK64344.1
COG3181 Uncharacterized protein conserved in bacteria.
  
     0.492
AFK60870.1
COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.462
AFK61521.1
COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.
       0.460
AFK62353.1
Hypothetical protein.
 
    0.423
AFK64430.1
Hypothetical protein.
 
    0.406
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.