STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61541.1ABC transporter substrate-binding protein; COG3181 Uncharacterized protein conserved in bacteria. (320 aa)    
Predicted Functional Partners:
AFK60870.1
COG3333 Uncharacterized protein conserved in bacteria.
  
 0.741
AFK61542.1
Mandelate racemase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.714
AFK61543.1
COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain.
       0.685
AFK61544.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
       0.685
AFK61545.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region; COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
       0.685
AFK60864.1
COG3181 Uncharacterized protein conserved in bacteria.
  
     0.669
AFK61540.1
COG2188 Transcriptional regulators.
       0.501
AFK62353.1
Hypothetical protein.
 
    0.426
AFK64430.1
Hypothetical protein.
 
    0.416
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (30%) [HD]