STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61549.1Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. (179 aa)    
Predicted Functional Partners:
AFK61551.1
COG3395 Uncharacterized protein conserved in bacteria.
 
     0.944
AFK61550.1
RuBisCO-like protein; COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
 
   
 0.941
AFK64118.1
COG3508 Homogentisate 1,2-dioxygenase.
  
 
 0.791
AFK61547.1
COG1609 Transcriptional regulators.
 
     0.728
AFK61372.1
Pyruvate carboxylase, propionyl-CoA carboxylase; COG0439 Biotin carboxylase.
  
  
 0.645
phhA
COG3186 Phenylalanine-4-hydroxylase.
  
  
 0.591
AFK63511.1
Putative pterin-4-alpha-carbinolamine dehydratase; COG2154 Pterin-4a-carbinolamine dehydratase.
  
  
 0.540
AFK62156.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.512
AFK61947.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
  
 0.501
AFK62829.1
COG1309 Transcriptional regulator.
  
   
 0.464
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.