STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61551.1COG3395 Uncharacterized protein conserved in bacteria. (452 aa)    
Predicted Functional Partners:
AFK61550.1
RuBisCO-like protein; COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
 
   
 0.953
AFK61549.1
Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases.
 
     0.944
AFK61547.1
COG1609 Transcriptional regulators.
 
   
 0.764
AFK64203.1
COG3395 Uncharacterized protein conserved in bacteria.
  
     0.557
AFK64444.1
COG3622 Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
 0.510
AFK61552.1
Hypothetical protein.
       0.439
AFK64286.1
Extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
    0.415
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.