STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61553.1Aminoglycoside/hydroxyurea antibiotic resistance kinase; COG3570 Streptomycin 6-kinase. (300 aa)    
Predicted Functional Partners:
AFK61554.1
MazG nucleotide pyrophosphohydrolase domain-containing protein; COG1694 Predicted pyrophosphatase.
       0.773
AFK61555.1
LysR family transcriptional regulator.
       0.678
AFK61556.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.678
AFK63612.1
Amine dehydrogenase.
  
     0.487
AFK61683.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.483
AFK61557.1
CoA-transferase; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.465
AFK61558.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.448
AFK63610.1
Amine dehydrogenase; Belongs to the aromatic amine dehydrogenase light chain family.
  
     0.417
AFK62976.1
Hypothetical protein; COG0470 ATPase involved in DNA replication.
  
     0.403
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.