STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61568.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
AFK61569.1
Hypothetical protein.
     0.983
AFK61570.1
Hypothetical protein.
     0.971
AFK64118.1
COG3508 Homogentisate 1,2-dioxygenase.
  
 
 0.719
AFK62100.1
Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
    
 0.675
AFK61372.1
Pyruvate carboxylase, propionyl-CoA carboxylase; COG0439 Biotin carboxylase.
  
  
 0.601
AFK61567.1
Hypothetical protein; COG2944 Predicted transcriptional regulator.
       0.468
AFK63511.1
Putative pterin-4-alpha-carbinolamine dehydratase; COG2154 Pterin-4a-carbinolamine dehydratase.
  
  
 0.444
AFK61571.1
ABC transporter substrate-binding protein; COG3181 Uncharacterized protein conserved in bacteria.
       0.435
phhA
COG3186 Phenylalanine-4-hydroxylase.
  
  
 0.433
AFK61074.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
  
 0.428
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.