STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61594.1FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). (371 aa)    
Predicted Functional Partners:
AFK63676.1
Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
  
  0.985
AFK63674.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.946
AFK63677.1
COG4583 Sarcosine oxidase gamma subunit.
  
 0.928
AFK63673.1
Sarcosine oxidase subunit beta; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 
0.919
AFK63675.1
Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
  
  0.918
AFK64287.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 
0.916
AFK64288.1
Putative Pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
 0.891
AFK64289.1
BFD/(2Fe-2S)-binding domain-containing protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
 
 0.836
AFK61596.1
Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
    0.760
AFK61595.1
Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family.
  
  
 0.735
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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