STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61597.1Spermidine/putrescine ABC transporter inner membrane protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II. (264 aa)    
Predicted Functional Partners:
AFK61598.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.999
AFK61599.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.997
AFK64414.1
Binding-protein-dependent transport system inner membrane protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  
 0.997
AFK64292.1
ABC transporter permease; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.996
AFK63101.1
Putative polyamine transport protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.983
AFK64417.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  0.975
AFK64416.1
Family 1 extracellular solute-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
 0.969
AFK64286.1
Extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
 
  0.966
AFK63100.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
   
 0.964
AFK64413.1
ABC transporter permease; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
  
 
0.913
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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