STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61629.1COG2891 Cell shape-determining protein. (132 aa)    
Predicted Functional Partners:
AFK61628.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.989
mrdA
Penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
 
  
 0.842
AFK61631.1
Rod shape-determining protein; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
  
 0.809
AFK61632.1
Rod shape-determining protein; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
  
  
 0.775
AFK63271.1
Hypothetical protein.
  
     0.771
AFK63519.1
Thioredoxin-like protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.766
AFK62228.1
Lysophospholipid transporter LplT; COG0477 Permeases of the major facilitator superfamily.
  
     0.764
AFK62958.1
Hypothetical protein.
  
     0.759
AFK63515.1
Phasin family domain-containing protein.
  
     0.750
AFK62376.1
Membrane protein.
 
     0.749
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.