STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61666.1Nitrate ABC transporter transmembrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (157 aa)    
Predicted Functional Partners:
AFK61665.1
Nitrate transporter NrtA; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.998
AFK61667.1
Nitrate transmembrane ABC transporter protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
     0.994
AFK61668.1
Nitrate transport ATP-binding subunits C and D; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
  0.994
AFK61669.1
Nitrate ABC transporter ATPases C and D; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 0.963
narZ
COG5013 Nitrate reductase alpha subunit.
    
 0.907
narH
COG1140 Nitrate reductase beta subunit.
  
 
  0.905
AFK60801.1
COG2181 Nitrate reductase gamma subunit.
     
  0.900
AFK61672.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
 0.715
AFK61670.1
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase.
       0.694
AFK61671.1
Assimilatory nitrite reductase large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.694
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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