STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61702.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
AFK61701.1
Acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
      0.915
AFK61700.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
    0.798
AFK61697.1
COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
       0.787
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain.
  
    0.786
pyrB-2
COG0540 Aspartate carbamoyltransferase, catalytic chain.
  
    0.786
AFK61696.1
Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
  
 0.673
AFK61695.1
Hypothetical protein; COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.648
AFK61694.1
COG1773 Rubredoxin.
       0.591
AFK62071.1
Hypothetical protein; COG3176 Putative hemolysin.
  
  
 0.504
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.