STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaHDiadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (270 aa)    
Predicted Functional Partners:
AFK64113.1
Hypothetical protein.
    
 0.990
AFK62538.1
Peptidylprolyl isomerase, FKBP-type; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
   
 0.957
AFK60825.1
Ankyrin repeat-containing protein; COG0666 FOG: Ankyrin repeat.
   
 0.891
AFK62548.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
   
 0.891
AFK64211.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
   
 0.885
AFK61704.1
Hypothetical protein; COG0795 Predicted permeases.
       0.845
apaG
CO2+/MG2+ efflux protein ApaG; COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport.
  
  
 0.759
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
     0.710
AFK61245.1
ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B.
  
     0.706
bamE
Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
     0.683
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.