STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61822.1COG4160 ABC-type arginine/histidine transport system, permease component. (238 aa)    
Predicted Functional Partners:
glnH
Glutamine ABC transporter periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  
 0.965
AFK61465.1
Periplasmic glutamine-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  
 0.955
glnH-2
Glutamine ABC transporter periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 0.942
AFK61821.1
Histidine ABC transporter, permease HisQ; COG4215 ABC-type arginine transport system, permease component.
 
 
0.931
AFK61820.1
Lysine-arginine-ornithine-binding periplasmic protein precursor; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  
 0.894
AFK61608.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  
 0.870
AFK61611.1
ABC transporter-like protein; COG4598 ABC-type histidine transport system, ATPase component.
  
 0.862
AFK61133.1
Lysine-arginine-ornithine-binding periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 0.842
AFK61823.1
Succinylglutamate desuccinylase/aspartoacylase family protein; COG3608 Predicted deacylase.
  
    0.811
AFK63418.1
Family 3 extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  
 0.800
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.