STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61831.1Zinc ABC transporter, periplasmic-binding protein ZnuA; COG3443 Predicted periplasmic or secreted protein. (225 aa)    
Predicted Functional Partners:
AFK62092.1
Cation ABC transporter ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
  
 
 0.938
AFK62090.1
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
 
 0.936
AFK64131.1
Periplasmic chelated iron-binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.936
AFK62093.1
ABC transporter in pyoverdin gene cluster, permease component; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 
 0.927
AFK61254.1
Transport protein ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
  
  
 0.703
AFK61255.1
ABC transporter permease; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
  
 0.653
AFK62310.1
COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
 
  
 0.633
AFK61251.1
CobW/HypB/UreG, nucleotide-binding domain-containing protein 5; COG0523 Putative GTPases (G3E family).
  
  
 0.441
AFK63227.1
Cobalamin synthesis protein/P47K family protein; COG0523 Putative GTPases (G3E family).
  
  
 0.441
AFK64143.1
Hypothetical protein; COG0523 Putative GTPases (G3E family).
  
  
 0.441
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.