STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61859.1ElaB-like protein. (105 aa)    
Predicted Functional Partners:
AFK61860.1
Hypothetical protein.
  
  
 0.924
AFK61861.1
Hypothetical protein.
       0.746
AFK63271.1
Hypothetical protein.
  
     0.716
AFK63411.1
Polar amino acid transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
   
 0.701
AFK63875.1
COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.649
AFK61320.1
COG3165 Uncharacterized protein conserved in bacteria.
  
   
 0.605
AFK63257.1
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
  
     0.584
AFK60784.1
COG5339 Uncharacterized protein conserved in bacteria.
  
    0.556
AFK62418.1
HemY, N-terminal domain-containing protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.525
AFK61121.1
Transglycosylase associated family protein; COG2261 Predicted membrane protein.
  
  
 0.517
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.