STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61895.1Citrate:proton symporter; COG0477 Permeases of the major facilitator superfamily. (439 aa)    
Predicted Functional Partners:
AFK61896.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
    0.740
AFK64390.1
COG0477 Permeases of the major facilitator superfamily.
  
   
 0.641
AFK62857.1
Transporter transmembrane protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.639
AFK61894.1
COG1846 Transcriptional regulators.
     
 0.513
AFK63683.1
Transporter; COG0477 Permeases of the major facilitator superfamily.
  
   
 0.494
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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