STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61904.1COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases. (313 aa)    
Predicted Functional Partners:
AFK63075.1
D-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 
0.922
glcE
Glycolate oxidase FAD binding subunit; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.907
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
 0.905
gph
Phosphoglycolate phosphatase, bacterial 1; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.905
AFK61455.1
HAD-superfamily hydrolase; COG0546 Predicted phosphatases.
    
 0.905
AFK62254.1
Hydrolase; COG0546 Predicted phosphatases.
    
 0.905
AFK63480.1
Haloacid dehalogenase-like protein hydrolase; COG0546 Predicted phosphatases.
    
 0.905
AFK62024.1
COG0346 Lactoylglutathione lyase and related lyases.
    
 0.903
AFK64446.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
 0.903
AFK64500.1
COG0346 Lactoylglutathione lyase and related lyases.
    
 0.903
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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