STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61918.1COG0412 Dienelactone hydrolase and related enzymes. (218 aa)    
Predicted Functional Partners:
AFK61539.1
COG0412 Dienelactone hydrolase and related enzymes.
  
  
 
0.924
AFK63993.1
COG1454 Alcohol dehydrogenase, class IV.
  
 
 0.914
AFK64040.1
COG1454 Alcohol dehydrogenase, class IV.
  
 
 0.914
AFK63714.1
Muconate and chloromuconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
   
 
 0.906
AFK61917.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.615
AFK63968.1
COG3917 2-hydroxychromene-2-carboxylate isomerase.
 
      0.576
AFK61919.1
COG2989 Uncharacterized protein conserved in bacteria.
       0.516
AFK61920.1
COG3108 Uncharacterized protein conserved in bacteria.
       0.470
AFK61132.1
Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 
     0.453
AFK61915.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
    0.428
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.