STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61936.1benzoyl-CoA oxygenase, component A; COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB. (421 aa)    
Predicted Functional Partners:
AFK61935.1
benzoyl-CoA oxygenase subunit B.
 
  
 0.994
AFK61934.1
benzoyl-CoA-dihydrodiol lyase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.989
AFK62810.1
COG2124 Cytochrome P450.
 
 
 0.892
AFK61679.1
COG0155 Sulfite reductase, beta subunit (hemoprotein).
 
 
 0.869
aroK-2
Anaerobic benzoate catabolism transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.867
AFK61932.1
Hypothetical protein.
 
     0.824
AFK61931.1
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase BoxD; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
   
 0.801
AFK61930.1
Extracellular ligand-binding receptor; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.786
AFK63068.1
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.777
AFK61929.1
Extracellular ligand-binding receptor; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.753
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.