STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61955.1COG3237 Uncharacterized protein conserved in bacteria. (59 aa)    
Predicted Functional Partners:
AFK61756.1
Hypothetical protein.
  
  
 0.758
AFK61956.1
COG3652 Predicted outer membrane protein.
  
    0.609
AFK60855.1
Hypothetical protein.
   
    0.555
AFK61612.1
Hypothetical protein.
   
    0.555
AFK61957.1
Hypothetical protein.
       0.514
AFK61958.1
Hypothetical protein.
       0.514
AFK63286.1
Ferritin Dps family protein; COG2193 Bacterioferritin (cytochrome b1).
  
    0.487
AFK64280.1
COG1596 Periplasmic protein involved in polysaccharide export.
   
    0.479
AFK62455.1
Hypothetical protein.
   
    0.445
AFK61291.1
Hypothetical protein; COG2823 Predicted periplasmic or secreted lipoprotein.
  
  
 0.426
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (28%) [HD]