STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61971.1Nucleotide sugar dehydrogenase subfamily protein; COG1004 Predicted UDP-glucose 6-dehydrogenase. (471 aa)    
Predicted Functional Partners:
AFK61970.1
Sugar nucleotide epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 0.999
AFK64377.1
UTP-glucose-1-phosphate uridylyltransferase; COG1210 UDP-glucose pyrophosphorylase.
 
 0.963
AFK61421.1
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.925
AFK64378.1
Dtdp-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.775
AFK64263.1
Mannose-1-phosphate guanylyltransferase-mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.742
AFK63837.1
UDP-N-acetylglucosamine C4 epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 0.648
AFK61425.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.644
AFK64379.1
COG1088 dTDP-D-glucose 4,6-dehydratase.
  
  
 0.580
AFK64380.1
COG1088 dTDP-D-glucose 4,6-dehydratase.
  
  
 0.580
AFK64381.1
COG1088 dTDP-D-glucose 4,6-dehydratase.
  
  
 0.580
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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