STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK61979.1COG2030 Acyl dehydratase. (152 aa)    
Predicted Functional Partners:
AFK64099.1
Dehydratase; COG2030 Acyl dehydratase.
  
     0.606
AFK62117.1
COG2030 Acyl dehydratase.
  
     0.576
AFK61178.1
Hypothetical protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.549
AFK61978.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.547
AFK62810.1
COG2124 Cytochrome P450.
 
  
 0.495
AFK61934.1
benzoyl-CoA-dihydrodiol lyase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.457
AFK61082.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.433
AFK61935.1
benzoyl-CoA oxygenase subunit B.
 
  
 0.419
AFK61435.1
COG1946 Acyl-CoA thioesterase.
 
 
 0.409
AFK61936.1
benzoyl-CoA oxygenase, component A; COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB.
 
 
 0.403
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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