STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK62008.1Lipoprotein. (72 aa)    
Predicted Functional Partners:
AFK62346.1
COG2134 CDP-diacylglycerol pyrophosphatase.
  
     0.685
AFK60784.1
COG5339 Uncharacterized protein conserved in bacteria.
  
    0.664
AFK61990.1
COG3121 P pilus assembly protein, chaperone PapD.
  
  
 0.658
AFK61988.1
Fimbrial biogenesis outer membrane usher protein; COG3188 P pilus assembly protein, porin PapC.
  
   
 0.647
AFK61041.1
COG5339 Uncharacterized protein conserved in bacteria.
  
    0.640
AFK61411.1
Hypothetical protein; COG3568 Metal-dependent hydrolase.
  
  
 0.610
AFK61008.1
Multidrug efflux system translocase MdfA; COG0477 Permeases of the major facilitator superfamily.
  
     0.509
AFK62529.1
COG2825 Outer membrane protein.
 
 
 0.494
AFK63413.1
Hypothetical protein.
  
 
 0.468
AFK61395.1
COG3455 Uncharacterized protein conserved in bacteria.
 
 
 0.466
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (22%) [HD]